Classification of enzymes

1. Classification on the basis of site of action
Enzymes are of two types based on site of action.
(i) Endoenzymes: Enzymes which act inside the cell are called endoenzymes. Such as Calvin cycle enzymes, Hatch-Slack cycle enzymes, Krebs cycle enzymes and glycolysis process enzymes.
(ii) Exoenzymes: Enzymes that act outside the cell are called exoenzymes. For example, lysozyme, digestive enzymes etc.

2. Structural classification of enzymes
Enzymes are divided into two groups based on structure. These are-
(i) Simple Enzymes: Enzymes which are made up of proteins only are called simple enzymes. For example, protease, amylase etc.
(ii) Composite Enzymes: Enzymes which are composed of proteins and other substances are called conjugated enzymes. A conjugated enzyme consists of two parts. Protein part and non-protein part. The protein part is called apoenzyme and the non-protein part is called prosthetic group.
3. Classification of enzymes based on chemical reactions
Enzymes are divided into 9 classes according to the nature of the chemical reaction. These are-
(i) Oxidoreductase: An enzyme that adds hydrogen, oxygen or electrons to a substance or releases hydrogen, oxygen or electrons from a substance is called an oxidoreductase enzyme. It is also called oxidative enzyme as it causes oxidation. For example, phosphoglyceraldehyde dehydrogenase, catalase, cytochrome oxidase, glucooxidase, reductase etc.
(ii) Hydrolytic/Hydrolase Enzyme: An enzyme that breaks down a substance by binding water molecules to specific bonds is called a hydrolytic enzyme. For example, protease, sucrase, phosphatase, esterase, lipase, carbohydrase, nuclease, pepsin, invertase, urease, amylase, maltase, trypsin etc.
(iii) Transferase: An enzyme that releases a group from a substance and attaches it to another substance is called a transferase enzyme. Such as hexokinase, kinase, trans amylase, trans acetylase, decarboxylase, methylase, protein kinase, polymerase etc.
(iv) Isomerase: An enzyme which converts a substance into its isomer is called an isomerase enzyme. Eg – phosphoglucoisomerase, phosphoglucomutase, racemase, mutase etc.
(v) Ligase: Enzyme which joins two or more substrates to form a new compound by taking energy from ATP is called ligase. Such as glutamic synthetase, acetyl Co-A synthetase, aspartic synthetase, succinic thiokinase, pyruvic carboxylase etc.
(vi) Lyase: Enzymes which act on carbon-carbon, carbon-oxygen and carbon-nitrogen bonds of substances are called lyases. Such as isocitrate, lyase, citric synthetase, aldolase, fumarase, decarboxylase, dehydratase, hydrolyase etc.
(vii) Carboxylase: An enzyme which combines CO2 with a substance or releases CO2 from a substance is called a carboxylase enzyme. Eg – carboxylase.
(viii) Phosphorylase Enzyme: An enzyme which adds phosphate group to a substance or removes phosphate group from a substance is called phosphorylase enzyme. For example – phosphofructokinase, phosphorylase, pyruvic acid kinase etc.
(ix) Epimerase: An enzyme which converts a substance into its epimer is called an epimerase enzyme. Epimer molecules differ only by the configuration of one carbon atom. Eg – Epimerase.

Enzyme nomenclature

1. By substrate name
Enzymes are named by adding ase to the end of the substrate name.
(i) Sucrose + ase = Sucrase
(ii) Urea + ase = Urease
(iii) Tyrosine + ase = Tyrosinase
(iv) Protein + ase = Protease
(v) Pectin + ase = Pectinase
(vi) Lipid + ase = Lipase
(vii) Amylose + ase = Amylase
(viii) Arginine + ase = Arginase
2. According to the name of the reaction
Enzymes are named after the reaction that the enzyme affects. Enzymes are named by adding ase to the end of the reaction name. (i) Hydrolysis + ase = Hydrolase
(ii) Oxidation + ase = Oxidase
(iii) Epimarism + ase = Epimarase
(iv) Transferation + ase = Transferase
(v) Reduction + ase = Reductase
(vi) Isomerism + ase = Isomerase
(vii) Phosphorylation + ase = Phophorylase
(viii) Polymerism + ase = Polymerase
(ix) Carboxylation + ase = Carboxylase
(x) Alcohol dehydration + ase = Alchohol dehydrogenase
(xi) Cytochrome oxidetion + ase = Cytochrome oxidase
(xii) Nitrate reduction + ase = Nitratereductase
3. Name the substrate and reactant
Some enzyme names consist of two parts. One part is by the name of the substrate and the other part is by the name of the reactant.
(i) Hexose + Kinase = Hexokinase
(ii) Fructose 6 phosphate + Kiase = Phosphofructokinase
(iii) Phosphoglyceric acid + Mutase = Phosphoglyceromutase
(iv) Glucose 6 phosphate + Isomerism = Phosphogluco-isomerase
(v) Pyruvic acid + Kinase = Pyruvic acid kinase
(vi) Pyruvic acid + Carboxilation = Pyruvic carboxilase
(vii) Malic acid + Dehydrogenase = Malic dehydrogenase

Co-Enzyme : Definition and Example

When the prosthetic group of the conjugated enzyme is formed by any biochemical substance, it is called co-enzyme. Some of the co-enzymes are-
1. FAD : Flavin Adenine Dinucleotide is abbreviated as FAD. It reacts with the dehydrogenase enzyme and converts to FADH2 by accepting or releasing hydrogen from the compound.
2. FADH2 : Reduced Flavin Adenine Dinucleotide is abbreviated as FADH2.
3. FMN: Flavin Mono Nucleotide is abbreviated as FMN.
4. NAD : Nicotinamide Adenine Dinucleotide is abbreviated as NAD. It reacts with dehydrogenase enzyme and converts to NADH2 by accepting or releasing hydrogen from the compound.
5. NADP : Nicotinamide Adenine Dinucleotide Phosphate is abbreviated as NADP. It reacts with the enzyme dehydrogenase and releases or accepts hydrogen from the compound to NADPH2.
6. NADPH2 : Reduced Nicotinamide Adenine Dinucleotide Phosphate is abbreviated as NADPH2.
7. CO-A : Co-enzyme A is abbreviated as CO-A. CO-A is composed of vitamin B, pyrophosphate and adenylic acid. It regulates fatty acid metabolism, citric acid cycle, sterol and acetyl choline synthesis.
8. ATP : Adenosine Triphos phate is abbreviated as ATP. It provides energy for various metabolic processes.
9. ADP: Adenosine Diphosphate is abbreviated as ADP. ADP and Pi combine to form ATP.
10. Cytochrome: Cytochrome is a type of CoA. It participates in the electron transport system. It participates in carbohydrate metabolism.

Chemical structure of Enzyme

Enzymes are composed of globular type proteins. The basic building blocks of proteins are amino acids. Enzymes can contain 62-2,500 different amino acids. Enzymes that are made up of only proteins are called simple enzymes. Many enzymes contain other components besides protein. Enzymes that are composed of protein and non-protein parts are called conjugated enzymes. The protein part of the conjugated enzyme is called the apo-enzyme and the non-protein part is called the prosthetic group. The apo-enzyme and the prosthetic group together are called holoenzymes. A co-factor if the prosthetic group is formed of a metal and a co-factor if it is formed of an organic chemical substance.

Enzyme activity

Enzymes that are secreted in the active state are called zymase. Tylin is a zymase enzyme. Enzymes that are secreted in inactive form are called zymogens. The inactive enzyme is converted to active enzyme in the presence of some metal ions. Enzyme activity increases in the presence of metal ions are called metal activators. Activating metals are – Mn++, K+, Mg++, Ca++, Zn++ etc. Pepsinogen and trypsinogen are enzymes of zymogen nature.

Chemical characteristics of Enzyme

1. Enzymes are made up of carbon, hydrogen, oxygen, nitrogen and sulphur.
2. All enzymes are proteins.
3. Amino acids that make up proteins are the basic building blocks of enzymes. The amino acid number and sequence of a specific enzyme is specific.
4. It exists in small amounts in chemical reactions.
5. High temperature (50-100°C) and exposure to ultraviolet rays destroy enzyme activity.
6. It is active in both acid and alkaline environment.
7. The enzyme is soluble in water, glycerol and mild alcohol.
8. Enzyme is degraded by ammonium sulphate, sodium chloride, picric acid etc.
9. Enzyme reactions can be unidirectional and bidirectional.
10. Enzyme action is accelerated in the presence of co-enzymes and co-factors.
11. The size of the substrate is smaller than the size of the enzyme.
12. Enzyme contains phosphorus, copper, zinc, iron, manganese, magnesium etc.